Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
artM_1ABC transporter ATP binding protein. (784 aa)    
Predicted Functional Partners:
cmpD
ABC transporter ATP-binding protein.
 
 
0.944
artM_2
ABC transporter ATP-binding protein.
 
 
0.858
CAT05167.1
ABC transporter permease protein.
  
 
 0.831
pr1
Multidrug resistance protein homolog.
 
   
 0.782
CAT04750.1
CONSERVED HYPOTHETICAL Conserved hypothetical prolipoprotein.
       0.718
bcrA
ABC transporter ATP binding protein.
 
  
 0.643
CAT05082.1
HYPOTHETICAL PROTEIN.
   
   0.588
CAT05262.1
HYPOTHETICAL PROTEIN.
   
   0.588
CAT04748.1
HYPOTHETICAL PROTEIN.
       0.512
CAT04752.1
HYPOTHETICAL PROTEIN.
       0.505
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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