Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAT04928.1 | CAT04934.1 | MCJ_002370 | MCJ_002430 | Lipoprotein. | HYPOTHETICAL PROTEIN. | 0.523 |
CAT04928.1 | oppB | MCJ_002370 | MCJ_002380 | Lipoprotein. | Oligopeptide ABC transporter permease protein. | 0.829 |
CAT04928.1 | oppC | MCJ_002370 | MCJ_002390 | Lipoprotein. | Oligopeptide transport system permease protein. | 0.853 |
CAT04928.1 | oppD-1 | MCJ_002370 | MCJ_002400 | Lipoprotein. | Oligopeptide ABC transporter ATP binding prote; Belongs to the ABC transporter superfamily. | 0.833 |
CAT04928.1 | oppF | MCJ_002370 | MCJ_002410 | Lipoprotein. | Oligopeptide ABC transporter ATP-binding prote; Belongs to the ABC transporter superfamily. | 0.918 |
CAT04934.1 | CAT04928.1 | MCJ_002430 | MCJ_002370 | HYPOTHETICAL PROTEIN. | Lipoprotein. | 0.523 |
CAT04934.1 | oppB | MCJ_002430 | MCJ_002380 | HYPOTHETICAL PROTEIN. | Oligopeptide ABC transporter permease protein. | 0.523 |
CAT04934.1 | oppC | MCJ_002430 | MCJ_002390 | HYPOTHETICAL PROTEIN. | Oligopeptide transport system permease protein. | 0.523 |
CAT04934.1 | oppD-1 | MCJ_002430 | MCJ_002400 | HYPOTHETICAL PROTEIN. | Oligopeptide ABC transporter ATP binding prote; Belongs to the ABC transporter superfamily. | 0.523 |
CAT04934.1 | oppF | MCJ_002430 | MCJ_002410 | HYPOTHETICAL PROTEIN. | Oligopeptide ABC transporter ATP-binding prote; Belongs to the ABC transporter superfamily. | 0.523 |
oppB | CAT04928.1 | MCJ_002380 | MCJ_002370 | Oligopeptide ABC transporter permease protein. | Lipoprotein. | 0.829 |
oppB | CAT04934.1 | MCJ_002380 | MCJ_002430 | Oligopeptide ABC transporter permease protein. | HYPOTHETICAL PROTEIN. | 0.523 |
oppB | oppC | MCJ_002380 | MCJ_002390 | Oligopeptide ABC transporter permease protein. | Oligopeptide transport system permease protein. | 0.999 |
oppB | oppD-1 | MCJ_002380 | MCJ_002400 | Oligopeptide ABC transporter permease protein. | Oligopeptide ABC transporter ATP binding prote; Belongs to the ABC transporter superfamily. | 0.997 |
oppB | oppF | MCJ_002380 | MCJ_002410 | Oligopeptide ABC transporter permease protein. | Oligopeptide ABC transporter ATP-binding prote; Belongs to the ABC transporter superfamily. | 0.998 |
oppC | CAT04928.1 | MCJ_002390 | MCJ_002370 | Oligopeptide transport system permease protein. | Lipoprotein. | 0.853 |
oppC | CAT04934.1 | MCJ_002390 | MCJ_002430 | Oligopeptide transport system permease protein. | HYPOTHETICAL PROTEIN. | 0.523 |
oppC | oppB | MCJ_002390 | MCJ_002380 | Oligopeptide transport system permease protein. | Oligopeptide ABC transporter permease protein. | 0.999 |
oppC | oppD-1 | MCJ_002390 | MCJ_002400 | Oligopeptide transport system permease protein. | Oligopeptide ABC transporter ATP binding prote; Belongs to the ABC transporter superfamily. | 0.999 |
oppC | oppF | MCJ_002390 | MCJ_002410 | Oligopeptide transport system permease protein. | Oligopeptide ABC transporter ATP-binding prote; Belongs to the ABC transporter superfamily. | 0.999 |
page 1 of 2