Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pimBCONSERVED HYPOTHETICAL Hypothetical transmembrane protein. (380 aa)    
Predicted Functional Partners:
polA_1
5-3 exonuclease.
   
 
 0.680
metS
Methionyl-tRNA synthetase.
  
 
 0.601
CAT04945.1
PUTATIVE UPF0122 protein MCAP_0480; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
    0.554
ftsY
Cell division protein ftsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
   
 
 0.551
CAT04949.1
HYPOTHETICAL Uncharacterized ATP-dependent helicase MG140.
       0.535
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
 
 0.506
trxA-2
PUTATIVE Thioredoxin.
     
 0.497
fruA
PTS system, fructose-specific IIABC component.
      
 0.474
kfoC_1
HYPOTHETICAL Uncharacterized glycosyltransferase MG335.2.
  
  
 0.466
rnjB_1
HYPOTHETICAL Uncharacterized protein MG423.
       0.447
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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