Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAT05016.1HYPOTHETICAL PROTEIN. (278 aa)    
Predicted Functional Partners:
CAT05017.1
HYPOTHETICAL PROTEIN.
 
 
 0.987
gtsA
Glycerol transporter subunit A.
  
 
 0.886
yigZ_1
Proline dipeptidase.
       0.783
ugpA
Sn-glycerol-3-phosphate transport system perme.
  
 
 0.673
malK_1
ABC TRANSPORTER ATP-BINDING PROTEIN; Belongs to the ABC transporter superfamily.
  
 
 0.672
CAT04691.1
HYPOTHETICAL Uncharacterized lipoprotein MPN_200.
  
   0.635
CAT04692.1
HYPOTHETICAL Uncharacterized lipoprotein MG260.
  
   0.635
ptsG
PTS system, glucose-specific IIABC component.
  
  
 0.519
CAT05019.1
Lipoprotein.
       0.487
fruA
PTS system, fructose-specific IIABC component.
   
  
 0.485
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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