Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAT05031.1HYPOTHETICAL PROTEIN. (171 aa)    
Predicted Functional Partners:
CAT05034.1
HYPOTHETICAL PROTEIN.
       0.776
atpA
ATP synthase alpha chain.
       0.776
atpD
ATP synthase beta chain.
       0.776
CAT05032.1
HYPOTHETICAL Uncharacterized protein UU050.
       0.768
CAT05030.1
HYPOTHETICAL PROTEIN.
       0.750
CAT05033.1
HYPOTHETICAL PROTEIN.
       0.732
CAT05037.1
HYPOTHETICAL Uncharacterized protein UU046.
       0.656
CAT05038.1
HYPOTHETICAL PROTEIN.
       0.613
CAT05040.1
HYPOTHETICAL PROTEIN.
       0.580
CAT05039.1
HYPOTHETICAL Uncharacterized protein UU046.
       0.507
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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