Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAT05071.1 | dnaX | MCJ_003830 | MCJ_003840 | UPF0133 protein MYPU_0500; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.816 |
| CAT05071.1 | holB_1 | MCJ_003830 | MCJ_003800 | UPF0133 protein MYPU_0500; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | HYPOTHETICAL PROTEIN. | 0.892 |
| CAT05071.1 | recR | MCJ_003830 | MCJ_003820 | UPF0133 protein MYPU_0500; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.967 |
| CAT05071.1 | tmk | MCJ_003830 | MCJ_003810 | UPF0133 protein MYPU_0500; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.851 |
| dnaE | dnaN | MCJ_005400 | MCJ_000020 | DNA polymerase III alpha subunit. | DNA polymerase III beta subunit. | 0.999 |
| dnaE | dnaX | MCJ_005400 | MCJ_003840 | DNA polymerase III alpha subunit. | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.998 |
| dnaE | holA_1 | MCJ_005400 | MCJ_000470 | DNA polymerase III alpha subunit. | HYPOTHETICAL PROTEIN. | 0.998 |
| dnaE | holB_1 | MCJ_005400 | MCJ_003800 | DNA polymerase III alpha subunit. | HYPOTHETICAL PROTEIN. | 0.992 |
| dnaE | polC | MCJ_005400 | MCJ_007160 | DNA polymerase III alpha subunit. | DNA polymerase III alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.954 |
| dnaE | ssb | MCJ_005400 | MCJ_003540 | DNA polymerase III alpha subunit. | Single-stranded DNA-binding protein. | 0.922 |
| dnaE | ssb-2 | MCJ_005400 | MCJ_004540 | DNA polymerase III alpha subunit. | Single-stranded DNA-binding protein. | 0.922 |
| dnaN | dnaE | MCJ_000020 | MCJ_005400 | DNA polymerase III beta subunit. | DNA polymerase III alpha subunit. | 0.999 |
| dnaN | dnaX | MCJ_000020 | MCJ_003840 | DNA polymerase III beta subunit. | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.996 |
| dnaN | holA_1 | MCJ_000020 | MCJ_000470 | DNA polymerase III beta subunit. | HYPOTHETICAL PROTEIN. | 0.997 |
| dnaN | holB_1 | MCJ_000020 | MCJ_003800 | DNA polymerase III beta subunit. | HYPOTHETICAL PROTEIN. | 0.992 |
| dnaN | polC | MCJ_000020 | MCJ_007160 | DNA polymerase III beta subunit. | DNA polymerase III alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.966 |
| dnaX | CAT05071.1 | MCJ_003840 | MCJ_003830 | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | UPF0133 protein MYPU_0500; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.816 |
| dnaX | dnaE | MCJ_003840 | MCJ_005400 | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III alpha subunit. | 0.998 |
| dnaX | dnaN | MCJ_003840 | MCJ_000020 | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III beta subunit. | 0.996 |
| dnaX | holA_1 | MCJ_003840 | MCJ_000470 | DNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | HYPOTHETICAL PROTEIN. | 0.992 |
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