Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAT05309.1 | phrA | MCJ_006140 | MCJ_006150 | Hexosephosphate transport protein. | HYPOTHETICAL Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.439 |
acpP_1 | infB | MCJ_006540 | MCJ_005430 | PUTATIVE Acyl carrier protein homolog. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.676 |
acpP_1 | lppS | MCJ_006540 | MCJ_004030 | PUTATIVE Acyl carrier protein homolog. | LppS lipoprotein. | 0.676 |
acpP_1 | phrA | MCJ_006540 | MCJ_006150 | PUTATIVE Acyl carrier protein homolog. | HYPOTHETICAL Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.747 |
acpP_1 | pr1 | MCJ_006540 | MCJ_002480 | PUTATIVE Acyl carrier protein homolog. | Multidrug resistance protein homolog. | 0.721 |
acpP_1 | pr2 | MCJ_006540 | MCJ_002490 | PUTATIVE Acyl carrier protein homolog. | Multidrug resistance protein homolog. | 0.721 |
acpP_1 | rpsQ | MCJ_006540 | MCJ_001400 | PUTATIVE Acyl carrier protein homolog. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.701 |
acpP_1 | ybeY | MCJ_006540 | MCJ_002780 | PUTATIVE Acyl carrier protein homolog. | Putative metalloprotease mhp224; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.729 |
infB | acpP_1 | MCJ_005430 | MCJ_006540 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | PUTATIVE Acyl carrier protein homolog. | 0.676 |
infB | phrA | MCJ_005430 | MCJ_006150 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | HYPOTHETICAL Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.636 |
infB | pr1 | MCJ_005430 | MCJ_002480 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Multidrug resistance protein homolog. | 0.566 |
infB | pr2 | MCJ_005430 | MCJ_002490 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Multidrug resistance protein homolog. | 0.566 |
infB | rpsQ | MCJ_005430 | MCJ_001400 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.945 |
infB | ybeY | MCJ_005430 | MCJ_002780 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Putative metalloprotease mhp224; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.702 |
lppS | acpP_1 | MCJ_004030 | MCJ_006540 | LppS lipoprotein. | PUTATIVE Acyl carrier protein homolog. | 0.676 |
lppS | phrA | MCJ_004030 | MCJ_006150 | LppS lipoprotein. | HYPOTHETICAL Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.636 |
lppS | pr1 | MCJ_004030 | MCJ_002480 | LppS lipoprotein. | Multidrug resistance protein homolog. | 0.566 |
lppS | pr2 | MCJ_004030 | MCJ_002490 | LppS lipoprotein. | Multidrug resistance protein homolog. | 0.566 |
lppS | rpsQ | MCJ_004030 | MCJ_001400 | LppS lipoprotein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.945 |
lppS | ybeY | MCJ_004030 | MCJ_002780 | LppS lipoprotein. | Putative metalloprotease mhp224; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.702 |
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