Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rpeRibulose-phosphate 3-epimerase. (217 aa)    
Predicted Functional Partners:
tkt
Transketolase; Belongs to the transketolase family.
 
 0.987
rpiB
Ribose 5-phosphate isomerase B.
  
 
 0.976
rsgA
Putative ribosome biogenesis GTPase rsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.961
tktA
Transketolase; Belongs to the transketolase family.
  
 0.957
sgaE
Sugar isomerase SgaE.
  
 
 0.916
CAT04783.1
D-ribulose-5-phosphate 3 epimerase.
     
 
0.900
fruA
PTS system, fructose-specific IIABC component.
  
  
 0.862
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
  
 0.845
rsmD_1
HYPOTHETICAL Ribosomal RNA small subunit methyltransferase D.
  
    0.825
prsA
Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
  
 0.754
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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