Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hhaIM_1Cytosine-specific methyltransferase. (211 aa)    
Predicted Functional Partners:
metK
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
    
 0.964
dcm_2
Cytosine-specific methyltransferase.
  
  
 
0.926
banIM_2
Cytosine-specific methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
  
 
0.919
pfs
HYPOTHETICAL MTA/SAH nucleosidase.
    
  0.903
CAT05331.1
HYPOTHETICAL PROTEIN.
       0.821
CAT05330.1
HYPOTHETICAL PROTEIN.
       0.701
CAT05333.1
HYPOTHETICAL CPG DNA methylase.
      0.692
polA_1
5-3 exonuclease.
     
 0.407
Your Current Organism:
Mycoplasma conjunctivae
NCBI taxonomy Id: 45361
Other names: ATCC 25834, M. conjunctivae, Mesomycoplasma conjunctivae, NCTC 10147, strain HRC/583
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