A0A0E0JF38 protein (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0E0JF38

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (292 aa)

Predicted Functional Partners:

A0A0E0KWR0

0.941

A0A0E0KYB3

0.941

A0A0E0M0J6

0.941

A0A0E0JGY3

0.938

A0A0E0LVS1

0.937

A0A0E0KS27

0.921

A0A0E0JMK0

0.873

A0A0E0JT92

0.873

A0A0E0L5G3

0.873

A0A0E0M9B2

0.871

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JF38	A0A0E0JGY3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.938
A0A0E0JF38	A0A0E0JMK0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.873
A0A0E0JF38	A0A0E0JT92	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	ATP-synt_ab_N domain-containing protein.	0.873
A0A0E0JF38	A0A0E0KS27	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	HORMA domain-containing protein.	0.921
A0A0E0JF38	A0A0E0KWR0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	J domain-containing protein.	0.941
A0A0E0JF38	A0A0E0KYB3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.941
A0A0E0JF38	A0A0E0L5G3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.873
A0A0E0JF38	A0A0E0LVS1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.937
A0A0E0JF38	A0A0E0M0J6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.941
A0A0E0JF38	A0A0E0M9B2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.871
A0A0E0JGY3	A0A0E0JF38	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.938
A0A0E0JGY3	A0A0E0JMK0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.800
A0A0E0JGY3	A0A0E0JT92	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	ATP-synt_ab_N domain-containing protein.	0.800
A0A0E0JGY3	A0A0E0KS27	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HORMA domain-containing protein.	0.982
A0A0E0JGY3	A0A0E0KWR0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	J domain-containing protein.	0.699
A0A0E0JGY3	A0A0E0KYB3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.699
A0A0E0JGY3	A0A0E0L5G3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.800
A0A0E0JGY3	A0A0E0LVS1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.931
A0A0E0JGY3	A0A0E0M0J6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.699
A0A0E0JMK0	A0A0E0JF38	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.873