STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JG24Pectinesterase. (615 aa)    
Predicted Functional Partners:
A0A0E0K1X9
Uncharacterized protein.
    
 0.715
A0A0E0M4P7
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.639
A0A0E0JMJ3
t-SNARE coiled-coil homology domain-containing protein.
    
 0.632
A0A0E0L5G5
Uncharacterized protein.
    
 0.632
A0A0E0KMG2
Pectate lyase.
  
 
 0.590
A0A0E0K6G6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.557
A0A0E0JLA1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.546
A0A0E0KH79
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.544
A0A0E0L3J7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
   0.544
A0A0E0LAV3
Nucleoporin_N domain-containing protein.
    
  0.543
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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