STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JHV3S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (394 aa)    
Predicted Functional Partners:
A0A0E0MPS2
Uncharacterized protein.
  
 0.976
A0A0E0MPS4
Uncharacterized protein.
  
 0.976
A0A0E0M1Y4
Aminotran_1_2 domain-containing protein.
  
 0.934
A0A0E0KSC2
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.931
A0A0E0JPA8
Hcy-binding domain-containing protein.
  
 
 0.923
A0A0E0KAN4
Hcy-binding domain-containing protein.
  
 
 0.923
A0A0E0MPF0
Hcy-binding domain-containing protein.
  
 
 0.923
A0A0E0LBE0
Aminotran_1_2 domain-containing protein.
  
 0.922
A0A0E0KU94
Aminotran_1_2 domain-containing protein.
  
 0.918
A0A0E0KZH7
Aminotran_1_2 domain-containing protein.
  
 0.918
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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