STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JIE0ULP_PROTEASE domain-containing protein. (642 aa)    
Predicted Functional Partners:
A0A0E0LNL1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.837
A0A0E0L552
DMAP1 domain-containing protein.
   
 0.734
A0A0E0JJF7
TAF domain-containing protein.
    
 0.718
A0A0E0KLZ5
MRG domain-containing protein.
   
 0.672
A0A0E0LR12
Uncharacterized protein; Belongs to the actin family.
    
 0.655
A0A0E0LDZ0
Uncharacterized protein.
    
 0.630
A0A0E0M134
Uncharacterized protein.
    
 0.616
A0A0E0M1J0
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.600
A0A0E0LTZ8
Enhancer of polycomb-like protein.
    
 0.578
A0A0E0LZB2
Enhancer of polycomb-like protein.
    
 0.578
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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