STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JKZ9Uncharacterized protein. (953 aa)    
Predicted Functional Partners:
A0A0E0LA35
Uncharacterized protein.
    
 0.696
A0A0E0KX34
Protein kinase domain-containing protein.
    
 0.674
A0A0E0KAB5
WD_REPEATS_REGION domain-containing protein.
    
 0.638
A0A0E0KLT5
Uncharacterized protein.
  
 
  0.615
A0A0E0JV94
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
  
 
 0.609
A0A0E0MHL3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 
 0.606
A0A0E0LMV7
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.605
A0A0E0KRZ5
WD_REPEATS_REGION domain-containing protein.
  
 
  0.600
A0A0E0MP74
WD_REPEATS_REGION domain-containing protein.
  
 
  0.593
A0A0E0K8V5
Uncharacterized protein.
    
 0.591
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.