STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JN43DUF4408 domain-containing protein. (255 aa)    
Predicted Functional Partners:
A0A0E0LFU1
Uncharacterized protein.
  
     0.524
A0A0E0JG75
Uncharacterized protein.
  
     0.512
A0A0E0KWR8
F-box domain-containing protein.
  
     0.498
A0A0E0MC13
Uncharacterized protein.
  
     0.493
A0A0E0JX40
ENT domain-containing protein.
  
     0.492
A0A0E0KWR3
F-box domain-containing protein.
  
     0.482
A0A0E0LHE2
Uncharacterized protein.
  
     0.480
A0A0E0KKG1
Uncharacterized protein.
  
     0.477
A0A0E0LJA7
FBD domain-containing protein.
  
     0.477
A0A0E0MJ71
Uncharacterized protein.
  
     0.477
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.