STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JNS6Tr-type G domain-containing protein. (664 aa)    
Predicted Functional Partners:
A0A0E0JNN6
Uncharacterized protein.
  
 
 0.869
A0A0E0KGA8
Ribosomal_TL5_C domain-containing protein.
  
   0.865
A0A0E0L3J7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.855
A0A0E0JCZ2
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.842
A0A0E0K3N9
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.842
A0A0E0KJH5
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.832
A0A0E0LPA4
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.832
A0A0E0JSY9
Uncharacterized protein.
   
   0.826
A0A0E0JZI6
Ribosomal_L2_C domain-containing protein.
    
 
 0.825
A0A0E0MNQ9
Ribosomal_L2_C domain-containing protein.
    
 
 0.825
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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