STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JRG9Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (411 aa)    
Predicted Functional Partners:
A0A0E0LC20
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.822
A0A0E0M7E5
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.822
A0A0E0JJ93
Tyrosine--tRNA ligase.
    
 0.746
A0A0E0KAC2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.701
A0A0E0L5M4
B5 domain-containing protein.
  
  
 0.646
A0A0E0JQD6
Uncharacterized protein.
  
 0.624
A0A0E0KNU3
tRNA-binding domain-containing protein.
  
 0.624
A0A0E0KYU9
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.601
A0A0E0M1D3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
  
 0.601
A0A0E0JDE5
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.591
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.