STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JRN05'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1067 aa)    
Predicted Functional Partners:
A0A0E0L243
RAI1 domain-containing protein.
   
 
 0.941
A0A0E0LU00
Uncharacterized protein.
    
 0.935
A0A0E0LYS6
Uncharacterized protein.
    
 0.935
A0A0E0MCN4
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
  
  
 
0.858
A0A0E0JT00
CID domain-containing protein.
    
 
 0.837
A0A0E0KVR5
CID domain-containing protein.
    
 
 0.837
A0A0E0MC03
CID domain-containing protein.
    
 
 0.837
A0A0E0MJ63
CID domain-containing protein.
    
 
 0.837
A0A0E0LIA5
Uncharacterized protein.
   
 0.766
A0A0E0KDB7
Bms1-type G domain-containing protein.
   
 
 0.750
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.