STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JUG1Uncharacterized protein. (78 aa)    
Predicted Functional Partners:
A0A0E0M9V2
Trehalase.
  
 0.861
A0A0E0L4P9
Glyco_transf_20 domain-containing protein.
     
 0.673
A0A0E0KWZ2
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.636
A0A0E0KQ53
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.606
A0A0E0JN85
Uncharacterized protein.
  
 
 0.605
A0A0E0KCV9
Thioredoxin domain-containing protein.
   
 0.597
A0A0E0JR80
CBM20 domain-containing protein.
  
 
 0.586
A0A0E0K566
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
  
 
 0.586
A0A0E0K5L9
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.586
A0A0E0K5M0
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.586
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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