STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JUY2Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
A0A0E0L9V4
Uncharacterized protein.
  
     0.489
A0A0E0MG49
Uncharacterized protein.
  
    0.487
A0A0E0JMZ2
Uncharacterized protein.
  
     0.472
A0A0E0LD89
Homeobox domain-containing protein.
  
     0.442
A0A0E0K5I3
M16C_associated domain-containing protein.
    
 
 0.436
A0A0E0LNT8
Ribosomal_L7Ae domain-containing protein.
  
    0.434
A0A0E0KXB7
NAC domain-containing protein.
  
 
 
 0.433
A0A0E0LT81
Uncharacterized protein.
  
     0.433
A0A0E0KXW8
Uncharacterized protein.
      
 0.432
A0A0E0KEF4
DFRP_C domain-containing protein.
  
     0.427
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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