STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JWR6Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (331 aa)    
Predicted Functional Partners:
A0A0E0LYC2
SMC_N domain-containing protein.
   
 0.985
A0A0E0L5R5
SP-RING-type domain-containing protein.
    
 0.984
A0A0E0L6N0
AAA_23 domain-containing protein.
   
 0.972
A0A0E0MGI2
Uncharacterized protein.
   
 0.972
A0A0E0MC05
zf-RING-like domain-containing protein.
   
 0.968
A0A0E0MJ65
zf-RING-like domain-containing protein.
   
 0.968
A0A0E0JV69
Structural maintenance of chromosomes protein.
   
 0.899
A0A0E0JV70
SMC hinge domain-containing protein.
   
 0.899
A0A0E0JG25
Uncharacterized protein.
   
 0.894
A0A0E0KE94
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
   
 0.894
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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