STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JY25Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (124 aa)    
Predicted Functional Partners:
A0A0E0L3J7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.995
A0A0E0KH79
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.994
A0A0E0KKL6
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.989
A0A0E0JCZ2
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.988
A0A0E0K3N9
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.988
A0A0E0MHG7
Uncharacterized protein.
  
 0.988
A0A0E0MMU2
Uncharacterized protein.
  
 0.988
A0A0E0JRW7
Uncharacterized protein.
  
 0.987
A0A0E0K988
Uncharacterized protein.
   
 0.987
A0A0E0LU66
Uncharacterized protein.
  
 0.987
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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