STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0JYS8Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
A0A0E0LPV5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.945
A0A0E0JEU6
DUF1767 domain-containing protein.
    
 0.937
A0A0E0K7H0
ERCC4 domain-containing protein.
    
 0.935
A0A0E0MD51
Helicase C-terminal domain-containing protein.
   
 0.908
A0A0E0JTK1
ERCC4 domain-containing protein.
    
 0.896
A0A0E0K014
Zinc-hook domain-containing protein.
  
 0.787
A0A0E0K017
AAA_23 domain-containing protein.
  
 0.787
A0A0E0K5Y9
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.783
A0A0E0KQU8
Uncharacterized protein.
  
 0.783
A0A0E0KS31
Uncharacterized protein.
  
 0.783
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.