STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0K173COX assembly mitochondrial protein. (82 aa)    
Predicted Functional Partners:
A0A0E0LL37
Uncharacterized protein.
    
 0.970
A0A0E0KBU1
PWI domain-containing protein.
   
 0.959
A0A0E0LQV2
Slu7 domain-containing protein.
    
 0.957
A0A0E0JV01
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.955
A0A0E0L0X0
Small nuclear ribonucleoprotein Sm D2.
    
 0.954
A0A0E0LHI6
Sm domain-containing protein.
    
 0.953
A0A0E0KPA0
Uncharacterized protein.
   
 
 0.945
A0A0E0KB37
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.944
A0A0E0JZ44
WD_REPEATS_REGION domain-containing protein.
   
 0.942
A0A0E0KER1
WD_REPEATS_REGION domain-containing protein.
   
 0.942
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.