STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0K1Z5Uncharacterized protein. (1771 aa)    
Predicted Functional Partners:
A0A0E0LMF6
Uncharacterized protein.
  
 
 0.670
A0A0E0KEN5
Uncharacterized protein.
  
 
 0.643
A0A0E0K496
Uncharacterized protein.
  
 
 0.593
A0A0E0KBA4
Uncharacterized protein.
    
 0.583
A0A0E0KBP9
Uncharacterized protein.
    
 0.583
A0A0E0L7H7
Uncharacterized protein.
    
 0.583
A0A0E0M0K9
Uncharacterized protein.
    
 0.583
A0A0E0M5T9
Uncharacterized protein.
    
 0.583
A0A0E0JLS9
Malate dehydrogenase.
    
 0.568
A0A0E0JQJ3
Malate dehydrogenase.
    
 0.568
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.