STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0K4D9Uncharacterized protein; Belongs to the ribose-phosphate pyrophosphokinase family. (325 aa)    
Predicted Functional Partners:
A0A0E0LA58
Uncharacterized protein.
  
 
 0.934
A0A0E0LK23
Uncharacterized protein.
  
 0.869
A0A0E0JTN6
Uncharacterized protein.
  
 
 0.857
A0A0E0K8F5
HisG_C domain-containing protein.
  
 
 0.852
A0A0E0K0C2
Uncharacterized protein.
   
 0.849
A0A0E0KGS3
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.849
A0A0E0KPY4
BAR domain-containing protein.
   
 0.849
A0A0E0LHL1
Transket_pyr domain-containing protein.
   
 0.849
A0A0E0LXC8
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.849
A0A0E0M369
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.849
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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