STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0KAM5Uncharacterized protein. (495 aa)    
Predicted Functional Partners:
A0A0E0KLL7
PCI domain-containing protein.
    
 0.676
A0A0E0KS17
PCI domain-containing protein.
    
 0.660
A0A0E0LWH1
Uncharacterized protein.
    
 0.642
A0A0E0KUY9
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.624
A0A0E0LSG9
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.624
A0A0E0L6L6
RPN13_C domain-containing protein.
   
 0.609
A0A0E0KB60
VWFA domain-containing protein.
   
 0.604
A0A0E0M5F4
VWFA domain-containing protein.
   
 0.604
A0A0E0KR32
PCI domain-containing protein.
    
 0.597
A0A0E0KZL3
PCI domain-containing protein.
    
 0.597
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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