STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0KCP1Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
A0A0E0KKL3
Uncharacterized protein.
  
    0.532
A0A0E0KV89
Uncharacterized protein.
  
     0.526
A0A0E0M3Q8
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.523
A0A0E0KD18
F-box domain-containing protein.
  
     0.517
A0A0E0JZB9
Uncharacterized protein.
  
     0.515
A0A0E0K828
BHLH domain-containing protein.
  
     0.515
A0A0E0M017
Uncharacterized protein.
  
     0.510
A0A0E0L9H3
Neprosin domain-containing protein.
  
     0.507
A0A0E0K4H2
Uncharacterized protein.
  
     0.506
A0A0E0KD20
Uncharacterized protein.
  
     0.504
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.