A0A0E0KGZ9 protein (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0E0KGZ9

SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (283 aa)

Predicted Functional Partners:

A0A0E0KQG9

0.539

A0A0E0KQG1

0.531

A0A0E0KIU5

0.528

A0A0E0MJU7

0.523

A0A0E0KM22

0.522

A0A0E0KRU8

0.520

A0A0E0JVY3

0.510

A0A0E0KCV7

0.509

A0A0E0JFN1

0.508

A0A0E0KIA6

0.507

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JFN1	A0A0E0JVY3	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.528
A0A0E0JFN1	A0A0E0KCV7	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.408
A0A0E0JFN1	A0A0E0KGZ9	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.508
A0A0E0JFN1	A0A0E0KIA6	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	AAI domain-containing protein.	0.533
A0A0E0JFN1	A0A0E0KIU5	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.535
A0A0E0JFN1	A0A0E0KM22	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.509
A0A0E0JFN1	A0A0E0KQG9	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	VQ domain-containing protein.	0.403
A0A0E0JFN1	A0A0E0KRU8	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.508
A0A0E0JFN1	A0A0E0MJU7	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	Uncharacterized protein.	0.520
A0A0E0JVY3	A0A0E0JFN1	Uncharacterized protein.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.528
A0A0E0JVY3	A0A0E0KCV7	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A0E0JVY3	A0A0E0KGZ9	Uncharacterized protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.510
A0A0E0JVY3	A0A0E0KIA6	Uncharacterized protein.	AAI domain-containing protein.	0.530
A0A0E0JVY3	A0A0E0KIU5	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A0E0JVY3	A0A0E0KM22	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A0E0JVY3	A0A0E0KQG9	Uncharacterized protein.	VQ domain-containing protein.	0.466
A0A0E0JVY3	A0A0E0KRU8	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A0E0JVY3	A0A0E0MJU7	Uncharacterized protein.	Uncharacterized protein.	0.525
A0A0E0KCV7	A0A0E0JFN1	Uncharacterized protein.	Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	0.408
A0A0E0KCV7	A0A0E0JVY3	Uncharacterized protein.	Uncharacterized protein.	0.525