STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0KJ44TP6A_N domain-containing protein. (376 aa)    
Predicted Functional Partners:
TOP6B
DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.
  
 
 0.955
A0A0E0MCE8
Uncharacterized protein; Belongs to the RecA family.
    
 0.748
A0A0E0MJK1
Uncharacterized protein; Belongs to the RecA family.
    
 0.748
A0A0E0JTK1
ERCC4 domain-containing protein.
    
 
 0.746
A0A0E0L0Q9
Rad51 domain-containing protein.
    
 0.742
A0A0E0L0R2
RECA_2 domain-containing protein.
    
 0.742
A0A0E0LRE6
TP6A_N domain-containing protein.
  
 
 
0.715
A0A0E0MH83
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily.
    
 0.678
A0A0E0MMM6
Uncharacterized protein; Belongs to the RecA family.
    
 0.678
A0A0E0K182
RECA_2 domain-containing protein.
    
 0.675
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.