STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0KQ04AA_TRNA_LIGASE_II domain-containing protein. (664 aa)    
Predicted Functional Partners:
A0A0E0L6R4
Uncharacterized protein.
    
 0.955
A0A0E0LXE6
Uncharacterized protein.
  
  
 
0.938
A0A0E0LC20
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.929
A0A0E0M7E5
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.929
A0A0E0JN61
Cytidine deaminase.
  
    0.846
A0A0E0JDE6
AA_TRNA_LIGASE_II_ALA domain-containing protein.
  
 
 0.834
A0A0E0M617
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.834
A0A0E0KC26
Uncharacterized protein.
  
 
 0.798
A0A0E0JK48
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.783
A0A0E0KA36
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.783
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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