STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0KT85Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
A0A0E0K1V8
Uncharacterized protein.
      
 0.642
A0A0E0KRW2
Uncharacterized protein.
      
 0.642
A0A0E0MKJ7
Uncharacterized protein.
  
   
 0.577
A0A0E0MKJ6
Uncharacterized protein.
  
   
 0.482
A0A0E0JG96
X8 domain-containing protein.
  
     0.446
A0A0E0KCV8
Uncharacterized protein.
      
 0.436
A0A0E0M2W2
Uncharacterized protein.
  
     0.435
A0A0E0K2S8
GRAM domain-containing protein.
  
     0.430
A0A0E0L674
Uncharacterized protein.
  
     0.424
A0A0E0M921
GRAM domain-containing protein.
  
     0.420
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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