STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L011DUF4220 domain-containing protein. (629 aa)    
Predicted Functional Partners:
A0A0E0JHX0
F-box domain-containing protein.
  
 
  0.615
A0A0E0KUC9
F-box domain-containing protein.
  
 
  0.587
A0A0E0M8C2
Shugoshin_C domain-containing protein.
  
 
  0.585
A0A0E0MGT4
DUF295 domain-containing protein.
  
 
  0.582
A0A0E0JLV2
DUF295 domain-containing protein.
  
 
  0.577
A0A0E0M0Z9
H15 domain-containing protein.
  
   0.540
A0A0E0JE69
Uncharacterized protein.
  
 
  0.539
A0A0E0K128
NAC domain-containing protein.
  
 
  0.537
A0A0E0MLZ9
Uncharacterized protein.
  
     0.537
A0A0E0M0T3
Uncharacterized protein.
  
 
   0.531
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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