STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L1P6HMA domain-containing protein. (333 aa)    
Predicted Functional Partners:
A0A0E0L5E7
Uncharacterized protein.
  
 
   0.533
A0A0E0LAF7
BURP domain-containing protein.
  
     0.528
A0A0E0L1L6
Uncharacterized protein.
  
     0.527
A0A0E0LI66
NAC domain-containing protein.
  
     0.521
A0A0E0LPT0
OVATE domain-containing protein.
  
     0.518
A0A0E0JMC8
NAC domain-containing protein.
  
     0.517
A0A0E0L881
Putative F-box domain containing protein.
  
 
   0.515
A0A0E0K1A5
Uncharacterized protein.
  
 
   0.513
A0A0E0LKG4
AAI domain-containing protein.
  
     0.513
A0A0E0MC84
NAC domain-containing protein.
  
     0.512
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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