STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L4J7Uncharacterized protein; Belongs to the peptidase A1 family. (650 aa)    
Predicted Functional Partners:
A0A0E0JS55
Rhodanese domain-containing protein.
   
 0.493
A0A0E0L8R6
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.493
A0A0E0KEL3
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.441
A0A0E0KEL9
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.441
A0A0E0LXZ6
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.441
A0A0E0KW06
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.430
A0A0E0L4G5
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.430
G9C2Y3_ORYPU
Putative oryzain beta chain; Belongs to the peptidase C1 family.
   
 0.430
G9C2Y5_ORYPU
Putative cysteine protease; Belongs to the peptidase C1 family.
   
 0.430
A0A0E0LSW5
Uncharacterized protein.
      
 0.429
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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