STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L5F4WD_REPEATS_REGION domain-containing protein. (336 aa)    
Predicted Functional Partners:
A0A0E0JXE8
Uncharacterized protein.
   
 
 0.999
A0A0E0KSB3
Uncharacterized protein.
   
 
 0.992
A0A0E0L3J7
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.991
A0A0E0K3Z7
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.988
A0A0E0LQM6
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.988
A0A0E0MNQ9
Ribosomal_L2_C domain-containing protein.
   
 
 0.988
A0A0E0JHL0
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.987
A0A0E0JMF3
Uncharacterized protein.
   
 
 0.987
A0A0E0KH79
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.987
A0A0E0K6G6
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.984
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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