STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L623Tr-type G domain-containing protein. (978 aa)    
Predicted Functional Partners:
A0A0E0LTM9
Ribosomal_L18e/L15P domain-containing protein.
   
 0.966
A0A0E0MNQ9
Ribosomal_L2_C domain-containing protein.
   
 0.960
A0A0E0JZI6
Ribosomal_L2_C domain-containing protein.
   
 0.959
A0A0E0KBA6
RF_PROK_I domain-containing protein.
  
 0.942
A0A0E0LU66
Uncharacterized protein.
   
 
 0.941
A0A0E0LIA1
Uncharacterized protein.
    
 0.934
A0A0E0JL73
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 0.929
A0A0E0MDF2
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.929
A0A0E0JRW7
Uncharacterized protein.
  
 0.928
A0A0E0JCZ2
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.926
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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