STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L6K9Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
A0A0E0JST1
Uncharacterized protein.
   
 0.985
A0A0E0KC68
Tho1_MOS11_C domain-containing protein.
   
 0.984
A0A0E0LA38
RRM domain-containing protein.
   
 0.980
A0A0E0LUT3
RRM domain-containing protein.
   
 0.980
A0A0E0LIR8
RRM domain-containing protein.
   
 0.978
A0A0E0K5M9
Uncharacterized protein.
   
 0.977
A0A0E0MBE5
RRM domain-containing protein.
   
 0.975
A0A0E0MIJ5
RRM domain-containing protein.
   
 0.975
A0A0E0LRH6
Uncharacterized protein.
   
 0.971
A0A0E0M0D6
WD_REPEATS_REGION domain-containing protein.
 
 
 0.965
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.