STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L7U9Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
A0A0E0MN60
Fibronectin type-III domain-containing protein.
  
     0.473
A0A0E0K4A9
Uncharacterized protein.
  
     0.471
A0A0E0KSW6
Uncharacterized protein.
  
     0.465
A0A0E0LPS4
Uncharacterized protein.
  
     0.431
A0A0E0MIZ8
Uncharacterized protein.
  
     0.427
A0A0E0KYE9
Fibronectin type-III domain-containing protein.
  
     0.426
A0A0E0KUJ8
Uncharacterized protein.
  
     0.420
A0A0E0JM25
Uncharacterized protein.
  
     0.412
A0A0E0MFK5
NB-ARC domain-containing protein.
  
     0.406
A0A0E0L9A3
Uncharacterized protein.
  
     0.403
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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