STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0L9U3Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
A0A0E0LEN8
Uncharacterized protein.
    
 0.998
A0A0E0KC51
Uncharacterized protein.
   
 0.907
A0A0E0LHX9
SAP domain-containing protein.
   
 0.889
A0A0E0MK42
Uncharacterized protein.
   
 0.875
A0A0E0JKB2
Uncharacterized protein.
    
 0.867
A0A0E0JMS3
Uncharacterized protein.
   
 0.867
A0A0E0KJ64
WD_REPEATS_REGION domain-containing protein.
   
 0.867
A0A0E0LQ68
Uncharacterized protein.
   
 0.867
A0A0E0M7X2
DWNN domain-containing protein.
    
 0.847
A0A0E0KYD9
Serine/threonine-protein phosphatase.
    
 0.841
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.