A0A0E0LCD7 protein (Oryza punctata) - STRING interaction network

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Score

A0A0E0LCD7

Uncharacterized protein. (368 aa)

Predicted Functional Partners:

A0A0E0KDN3

0.646

A0A0E0K2B5

0.636

A0A0E0JY78

0.618

A0A0E0MPE5

0.586

A0A0E0JUN9

0.585

A0A0E0LY91

0.576

A0A0E0LHM9

0.556

A0A0E0M3B9

0.549

A0A0E0JV01

0.548

A0A0E0KCL3

0.534

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JUN9	A0A0E0JV01	RPOL4c domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.902
A0A0E0JUN9	A0A0E0K2B5	RPOL4c domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.960
A0A0E0JUN9	A0A0E0KCL3	RPOL4c domain-containing protein.	Uncharacterized protein.	0.620
A0A0E0JUN9	A0A0E0LCD7	RPOL4c domain-containing protein.	Uncharacterized protein.	0.585
A0A0E0JUN9	A0A0E0LHM9	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
A0A0E0JUN9	A0A0E0LY91	RPOL4c domain-containing protein.	RPOLD domain-containing protein.	0.999
A0A0E0JUN9	A0A0E0M3B9	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.770
A0A0E0JUN9	A0A0E0MPE5	RPOL4c domain-containing protein.	Uncharacterized protein.	0.936
A0A0E0JV01	A0A0E0JUN9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RPOL4c domain-containing protein.	0.902
A0A0E0JV01	A0A0E0JY78	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.996
A0A0E0JV01	A0A0E0K2B5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Nuclear cap-binding protein subunit 2.	0.996
A0A0E0JV01	A0A0E0KCL3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.986
A0A0E0JV01	A0A0E0KDN3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	MIF4G domain-containing protein.	0.994
A0A0E0JV01	A0A0E0LCD7	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.548
A0A0E0JV01	A0A0E0LHM9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RNA_pol_L_2 domain-containing protein.	0.968
A0A0E0JV01	A0A0E0LY91	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RPOLD domain-containing protein.	0.833
A0A0E0JV01	A0A0E0M3B9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RRM domain-containing protein.	0.970
A0A0E0JY78	A0A0E0JV01	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
A0A0E0JY78	A0A0E0K2B5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Nuclear cap-binding protein subunit 2.	0.960
A0A0E0JY78	A0A0E0KCL3	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Uncharacterized protein.	0.988