STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0LEH9Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
A0A0E0K262
TRAF-type domain-containing protein.
    
 0.543
A0A0E0K5R3
Uncharacterized protein.
    
 0.543
A0A0E0L0S1
TRAF-type domain-containing protein.
    
 0.543
A0A0E0KBP6
Uncharacterized protein.
      
 0.478
A0A0E0KVC7
OTU domain-containing protein.
      
 0.478
A0A0E0KW28
Uncharacterized protein.
      
 0.478
A0A0E0JMH1
Sde2_N_Ubi domain-containing protein.
   
 0.475
A0A0E0JG29
Ubiquitin-like domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.458
A0A0E0JYM8
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.458
A0A0E0L6H7
Uncharacterized protein.
   
 0.458
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.