STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0LPC2PseudoU_synth_2 domain-containing protein. (495 aa)    
Predicted Functional Partners:
A0A0E0ML01
Uncharacterized protein.
  
 
 0.849
A0A0E0KHJ3
SpoU_methylase domain-containing protein.
  
 
 0.826
A0A0E0MF68
G domain-containing protein.
   
 
 0.810
A0A0E0LTM9
Ribosomal_L18e/L15P domain-containing protein.
  
   0.798
A0A0E0L795
Uncharacterized protein.
    
 
 0.797
A0A0E0LET3
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
   0.796
A0A0E0KAB0
L51_S25_CI-B8 domain-containing protein.
   
   0.787
A0A0E0JY52
Uncharacterized protein.
   
   0.782
A0A0E0L5L7
Uncharacterized protein.
   
   0.782
A0A0E0JPB0
TRUD domain-containing protein.
    
 
 0.751
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.