STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0LYT0FRIGIDA-like protein; Belongs to the Frigida family. (543 aa)    
Predicted Functional Partners:
A0A0E0LLK9
LEA_2 domain-containing protein.
  
     0.531
A0A0E0M4Q6
Uncharacterized protein.
  
     0.506
A0A0E0KJI1
Uncharacterized protein.
  
     0.505
A0A0E0LWK2
EF-hand domain-containing protein.
  
     0.502
A0A0E0M2N6
Uncharacterized protein.
  
     0.497
A0A0E0LGL6
BTB domain-containing protein.
  
     0.486
A0A0E0JGG0
CCHC-type domain-containing protein.
  
     0.479
A0A0E0L629
Uncharacterized protein.
  
     0.478
A0A0E0LFX9
Uncharacterized protein.
  
     0.474
A0A0E0LIE2
Remorin_C domain-containing protein.
  
     0.471
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.