STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0LZ17Uncharacterized protein. (129 aa)    
Predicted Functional Partners:
A0A0E0MHJ1
Uncharacterized protein.
    
 0.685
A0A0E0LD24
Uncharacterized protein.
    
 
 0.681
A0A0E0K145
Uncharacterized protein.
   
 
 0.670
A0A0E0JYQ5
Uncharacterized protein.
   
 
 0.612
A0A0E0M8F8
Uncharacterized protein.
   
 
 0.612
A0A0E0K1V8
Uncharacterized protein.
   
   0.420
A0A0E0K2J9
Uncharacterized protein.
   
   0.420
A0A0E0KRW2
Uncharacterized protein.
   
   0.420
A0A0E0KAZ8
Uncharacterized protein.
    
 
 0.400
A0A0E0M758
Uncharacterized protein.
    
 
 0.400
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.