STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0M0E8G domain-containing protein. (599 aa)    
Predicted Functional Partners:
A0A0E0LJV9
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.966
A0A0E0KHU7
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.963
A0A0E0LMY5
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.952
A0A0E0LV01
RRM domain-containing protein.
   
 
 0.909
A0A0E0ML01
Uncharacterized protein.
  
 
 0.890
A0A0E0LY20
Matrin-type domain-containing protein.
   
 
 0.876
A0A0E0KRN0
Ipi1_N domain-containing protein.
   
 0.872
A0A0E0L5V0
Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
  
 
 0.858
A0A0E0LPL4
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.858
A0A0E0K3U2
M20_dimer domain-containing protein.
    
  0.856
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.