A0A0E0M2M1 protein (Oryza punctata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0E0M2M1

Uncharacterized protein. (384 aa)

Predicted Functional Partners:

A0A0E0JYH6

0.580

A0A0E0KCV8

0.504

A0A0E0JPL5

0.453

A0A0E0KCK9

0.440

A0A0E0LQ40

0.440

A0A0E0JR08

0.439

A0A0E0L3A8

0.439

A0A0E0KDA7

0.424

A0A0E0L0U5

0.424

A0A0E0LPV2

0.424

Your Current Organism:

Oryza punctata

NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0JPL5	A0A0E0JYH6	EF-hand domain-containing protein.	Uncharacterized protein.	0.534
A0A0E0JPL5	A0A0E0M2M1	EF-hand domain-containing protein.	Uncharacterized protein.	0.453
A0A0E0JR08	A0A0E0L3A8	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
A0A0E0JR08	A0A0E0M2M1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Uncharacterized protein.	0.439
A0A0E0JYH6	A0A0E0JPL5	Uncharacterized protein.	EF-hand domain-containing protein.	0.534
A0A0E0JYH6	A0A0E0KCV8	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0JYH6	A0A0E0KDA7	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0JYH6	A0A0E0L0U5	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0JYH6	A0A0E0LPV2	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0JYH6	A0A0E0M2M1	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A0E0KCK9	A0A0E0LQ40	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.938
A0A0E0KCK9	A0A0E0M2M1	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.440
A0A0E0KCV8	A0A0E0JYH6	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0KCV8	A0A0E0KDA7	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A0E0KCV8	A0A0E0L0U5	Uncharacterized protein.	Uncharacterized protein.	0.494
A0A0E0KCV8	A0A0E0LPV2	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0E0KCV8	A0A0E0M2M1	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A0E0KDA7	A0A0E0JYH6	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0E0KDA7	A0A0E0KCV8	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A0E0KDA7	A0A0E0M2M1	Uncharacterized protein.	Uncharacterized protein.	0.424