STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0M3C5Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
A0A0E0JIE9
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
A0A0E0JE30
Uncharacterized protein.
    
 0.992
A0A0E0K3M3
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.967
A0A0E0L1F7
Uncharacterized protein.
     
 0.967
A0A0E0JWV4
Uncharacterized protein.
     
 0.957
A0A0E0KA21
Uncharacterized protein.
     
 0.957
A0A0E0JMY6
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.954
A0A0E0L589
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.954
A0A0E0LMN3
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.950
A0A0E0KKE4
Uncharacterized protein.
     
 0.917
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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