STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MBM8Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
A0A0E0JP73
Uncharacterized protein.
   
 
 0.626
A0A0E0JN00
Uncharacterized protein.
     
 0.575
A0A0E0L6D2
SET domain-containing protein.
     
 0.574
A0A0E0JSC3
S1 motif domain-containing protein.
     
 0.573
A0A0E0KG64
PfkB domain-containing protein.
   
 
 0.566
A0A0E0LGQ9
Uncharacterized protein.
  
   
 0.556
A0A0E0MNF4
Uncharacterized protein.
  
     0.537
A0A0E0KDK2
Uncharacterized protein.
  
     0.534
A0A0E0L163
Uncharacterized protein.
  
    0.528
A0A0E0ME70
PMR5N domain-containing protein.
  
     0.525
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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