STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MIF1CYCLIN domain-containing protein; Belongs to the cyclin family. (333 aa)    
Predicted Functional Partners:
A0A0E0JS64
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.825
A0A0E0LXE9
Uncharacterized protein.
    
 0.824
A0A0E0MFZ7
Uncharacterized protein.
    
 0.824
A0A0E0JUW1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.820
A0A0E0JVC7
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.654
A0A0E0KIT0
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.636
A0A0E0L246
Protein kinase domain-containing protein.
    
 0.625
A0A0E0L324
Histone deacetylase.
   
 0.607
A0A0E0LHG7
RanBP2-type domain-containing protein.
   
 0.607
A0A0E0LN00
Histone deacetylase.
   
 0.607
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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